CohortConstructor - Build and Manipulate Study Cohorts Using a Common Data Model
Create and manipulate study cohorts in data mapped to the Observational Medical Outcomes Partnership Common Data Model.
Last updated
10.81 score 10 stars 4 dependents 279 scripts 1.4k downloads
CodelistGenerator - Identify Relevant Clinical Codes and Evaluate Their Use
Generate a candidate code list for the Observational Medical Outcomes Partnership (OMOP) common data model based on string matching. For a given search strategy, a candidate code list will be returned.
Last updated
10.50 score 18 stars 7 dependents 366 scripts 1.8k downloads
PhenotypeR - Assess Study Cohorts Using a Common Data Model
Phenotype study cohorts in data mapped to the Observational Medical Outcomes Partnership Common Data Model. Diagnostics are run at the database, code list, cohort, and population level to assess whether study cohorts are ready for research.
Last updated
7.96 score 9 stars 52 scripts 855 downloads
IncidencePrevalence - Estimate Incidence and Prevalence using the OMOP Common Data Model
Calculate incidence and prevalence using data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Incidence and prevalence can be estimated for the total population in a database or for a stratification cohort.
Last updated
7.46 score 15 stars 1 dependents 182 scripts 526 downloads
OmopOnSpark - Using a Common Data Model on Spark
Use health data in the Observational Medical Outcomes Partnership Common Data Model format in Spark.
Last updated
4.78 score 218 downloads